Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862776.1_cds_XP_016515462.1_27804
CDS Infomation

[gene=LOC107832164] [db_xref=GeneID:107832164] [protein=transcription factor ABORTED MICROSPORES-like] [protein_id=XP_016515462.1] [location=join(47449..47543,47839..48021,48276..48354,48443..48511,49224..49829,50052..50357,50795..50971,52053..52280)] [gbkey=CDS]
Sequence

ATGGAACTCATGCATCTAATGGAGAGGCTTAGGCCTATTATGGGCTTAAAAAACTGGGAT
TACTGTGTTTTATGGAAGTTGAGTGAAGATCAAAGGTTTCTTGAATGGATTTGTTGCTGT
TGTGGTGGAGCTGAGCAAAATATGCATAGCTGTGAACAAGAGCTACTTTTCCCTGATTCT
TCTACCTCACCTTGTAGAGATGTTATGTTTCAGCATCCAAGAACAACTGCTTGTGATTTA
CTGGCTCAGCTGCCTTCTTCTCTAGCACTAGACTCCGGGATTTATGCACAGGCCTTGCTT
TCTAATCAAGCAAAATGGGTGAACTTTGTACCTTTCTCAGAATCAAATGTGTCTAATGAA
ATAATTGGAACCAAAGTTTTGATTCCATCTCCTCTTGGATTGCTTGAGTTATTCGGTGCC
AAACAACTACCAGAAGATGAGAAAGTCATAGACTTTGTCTCAACTCAATGCAACATCTAC
TTGGAGCAGCATAAATTCCCATCAAATGGAGATGACAATACAAATTCCCAAAATCTTTAT
CAGCAAATAGTCTCCCCTGTTACATCAAGAGACCATTCAGATCAATTATCATATGATTTC
CCTCTTAAAAGAAAAAACCTGGATACTTCTTCAATGAACTTCCTTCCACATTTCAATACT
TACAACACCTCAGAAATCGAAAACAACACAACGACAATGTTATTCGATCAGAACACAAGC
GATGTGACACATTTTTCAACTTCAATGGAGAATAAGTACATGAGTGAAATGGATGCTTAT
TTACAGAAGCAAATGATGAGAAATAGTAGTAATCAAACTGGATTAATTGATGATGAATCT
GTTAAACAACATGATAATGGAAGATCTAATTCGGGATCGGATAGTGATCAAAATGAAGAT
GAAGATGATCCTAAGTTTAGAAGGAGAAATGGAAAGGGTCAATCCAAGAATCTTGTGGCT
GAAAGGAAAAGAAGGAAGAAACTTAATGAAAGGCTCTATGCTCTTAGAGCTTTGGTTCCC
AAAATTTCTAAGTTGGATAGAGCTTCAATACTTGGAGATGCTATTGAATATGTGATGGAA
TTGGAAAAGCAAGTGAAAGATCTACAGCTTGAGCTTGAAGAACATTCAGATGATGATCAG
GGTGGTAGGAATCAGAACCAGGTTCAGCCTGAGGTTTTAGGCCAAAATGGAAGTGATCAA
AATAACAGGCCTAAATCAGAAAATGTAAAACTTTCAAATGGAAGTCATACAGGAATATCA
GCTAATTCCAATGGCAGCATTGATCCTTCTAGACAAAATCAAGAGGTAGAAGACAATGAC
AAACTGCAGCAAATGGAGCCACAAGTGGAAGTAGCACAATTGGATGGGAATGAGTTCTTT
GTGAAGGTGTTTCGAGAGCACAAGGCAGGTGGATTTGTGAGGATATTGGAGGCTTTGAAC
TCATTGGGCTTGGCGGTTACAAATGTAAATGCAACTAGGCATACTTGTTTGGTATCAAGT
ATCTTCAAAGTAGAAAAAAGGGACAATGAAATGGTTCAAGCTGATCATGTGAGGGAGTCC
TTGCTAGAGCTGACAAGAAACCCTAGTAAAGGGTGGTCTGAAATGGGTAGACCATCATCA
GAAAATAATGCAAATGGAAGTACAAATTATCTCCATAATAATCAACATCAGCACCACCTT
GAGAATAATCACCAGAAGCAAGCTGCCAATTCTCATCACTTCCATCGACACCATCACATG
TAA

Peptide Sequence

PEP ID

XP_016515462.1
PEP Infomation

PREDICTED: transcription factor ABORTED MICROSPORES-like [Nicotiana tabacum]
Sequence

MELMHLMERLRPIMGLKNWDYCVLWKLSEDQRFLEWICCCCGGAEQNMHSCEQELLFPDS
STSPCRDVMFQHPRTTACDLLAQLPSSLALDSGIYAQALLSNQAKWVNFVPFSESNVSNE
IIGTKVLIPSPLGLLELFGAKQLPEDEKVIDFVSTQCNIYLEQHKFPSNGDDNTNSQNLY
QQIVSPVTSRDHSDQLSYDFPLKRKNLDTSSMNFLPHFNTYNTSEIENNTTTMLFDQNTS
DVTHFSTSMENKYMSEMDAYLQKQMMRNSSNQTGLIDDESVKQHDNGRSNSGSDSDQNED
EDDPKFRRRNGKGQSKNLVAERKRRKKLNERLYALRALVPKISKLDRASILGDAIEYVME
LEKQVKDLQLELEEHSDDDQGGRNQNQVQPEVLGQNGSDQNNRPKSENVKLSNGSHTGIS
ANSNGSIDPSRQNQEVEDNDKLQQMEPQVEVAQLDGNEFFVKVFREHKAGGFVRILEALN
SLGLAVTNVNATRHTCLVSSIFKVEKRDNEMVQADHVRESLLELTRNPSKGWSEMGRPSS
ENNANGSTNYLHNNQHQHHLENNHQKQAANSHHFHRHHHM

Transcript Sequence

Gene sequence data has not been registered.